Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_20685 | Not Available | Positive | 4677551 - 4679365 | 68131.4 |
| hypothetical protein | DWY53_20690 | Not Available | Positive | 4680061 - 4680549 | 18914.2 |
| hypothetical protein | DWY53_20695 | Not Available | Positive | 4680572 - 4681246 | 26387.8 |
| recombinase family protein | DWY53_20700 | Not Available | Negative | 4681322 - 4683088 | 68251.5 |
| tigr03905 family tscpd domain-containing protein | DWY53_20705 | Not Available | Positive | 4683197 - 4683442 | 9080.04 |
| hypothetical protein | DWY53_20710 | Not Available | Negative | 4683558 - 4683761 | 7305.05 |
| aaa family atpase | DWY53_20720 | Not Available | Negative | 4684093 - 4684848 | 28910.3 |
| is21 family transposase | DWY53_20725 | Not Available | Negative | 4684860 - 4686458 | 61570.3 |
| hypothetical protein | DWY53_20730 | Not Available | Negative | 4686623 - 4686862 | 9121.88 |
| susc/raga family tonb-linked outer membrane protein | DWY53_20735 | Not Available | Positive | 4687579 - 4690275 | 98617.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

