Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hesa/moeb/thif family protein | DWY53_20630 | Not Available | Positive | 4666090 - 4666824 | 27043.9 |
| glutathionylspermidine synthase family protein | DWY53_20635 | Not Available | Negative | 4666937 - 4668061 | 43089.6 |
| hypothetical protein | DWY53_20640 | Not Available | Negative | 4668074 - 4668427 | 12947.3 |
| thiamine phosphate synthase | DWY53_20645 | Not Available | Positive | 4668647 - 4669255 | 22934.7 |
| ribose-phosphate pyrophosphokinase | DWY53_20650 | Not Available | Positive | 4669420 - 4670358 | 34190.5 |
| extracellular solute-binding protein | DWY53_20655 | Not Available | Negative | 4670488 - 4671798 | 50297.2 |
| abc transporter permease | DWY53_20660 | Not Available | Negative | 4671826 - 4672617 | 28734.3 |
| abc transporter permease | DWY53_20665 | Not Available | Negative | 4672611 - 4673384 | 28468.5 |
| polyamine abc transporter atp-binding protein | DWY53_20670 | Not Available | Negative | 4673421 - 4674809 | 51886.3 |
| ahpc/tsa family protein | DWY53_20680 | Not Available | Positive | 4675338 - 4676429 | 40190.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

