Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transporter | DWY53_20575 | Not Available | Positive | 4655550 - 4657220 | 60144.9 |
| abc transporter atp-binding protein | DWY53_20580 | Not Available | Positive | 4657336 - 4658970 | 61961.7 |
| rna polymerase sigma-70 factor | DWY53_20585 | Not Available | Positive | 4659010 - 4659591 | 22722.7 |
| sulfur carrier protein this | DWY53_20595 | Not Available | Positive | 4660408 - 4660608 | 7153.82 |
| thiamine phosphate synthase | DWY53_20600 | Not Available | Positive | 4660598 - 4661224 | 23039.0 |
| thiazole synthase | DWY53_20605 | Not Available | Positive | 4661242 - 4662015 | 27519.5 |
| phosphomethylpyrimidine synthase thic | DWY53_20610 | Not Available | Positive | 4662024 - 4663724 | 63475.9 |
| hypothetical protein | DWY53_20615 | Not Available | Positive | 4663746 - 4664261 | 19574.8 |
| flavodoxin family protein | DWY53_20620 | Not Available | Positive | 4664261 - 4664833 | 21328.5 |
| 2-iminoacetate synthase thih | DWY53_20625 | Not Available | Positive | 4664922 - 4666052 | 43251.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

