Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_20520 | Not Available | Negative | 4640332 - 4640511 | 7124.83 |
| hypothetical protein | DWY53_20525 | Not Available | Positive | 4640521 - 4640730 | 7584.23 |
| moba protein | DWY53_20530 | Not Available | Positive | 4641123 - 4641545 | 16458.4 |
| mobilization protein | DWY53_20535 | Not Available | Positive | 4641530 - 4641912 | 14116.8 |
| tonb-dependent receptor | DWY53_20545 | Not Available | Positive | 4642851 - 4645175 | 88632.4 |
| duf1232 domain-containing protein | DWY53_20550 | Not Available | Positive | 4645320 - 4645682 | 13960.1 |
| tonb-dependent receptor | DWY53_20555 | Not Available | Positive | 4646122 - 4649367 | 119681.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWY53_20560 | Not Available | Positive | 4649381 - 4650871 | 55874.7 |
| methylmalonyl-coa mutase | DWY53_20565 | Not Available | Negative | 4651194 - 4653344 | 79111.7 |
| methylmalonyl-coa mutase small subunit | DWY53_20570 | Not Available | Negative | 4653354 - 4655264 | 70536.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

