Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trag family conjugative transposon atpase | DWY53_20465 | Not Available | Negative | 4630539 - 4633064 | 97207.9 |
| duf4133 domain-containing protein | DWY53_20470 | Not Available | Negative | 4633061 - 4633390 | 12710.0 |
| duf4134 domain-containing protein | DWY53_20475 | Not Available | Negative | 4633396 - 4633692 | 10417.8 |
| hypothetical protein | DWY53_20480 | Not Available | Positive | 4634319 - 4635035 | 27276.7 |
| hypothetical protein | DWY53_20485 | Not Available | Positive | 4635047 - 4635832 | 29964.2 |
| hypothetical protein | DWY53_20490 | Not Available | Positive | 4635826 - 4636332 | 19290.2 |
| hypothetical protein | DWY53_20495 | Not Available | Positive | 4636337 - 4636708 | 14175.9 |
| duf4122 domain-containing protein | DWY53_20505 | Not Available | Negative | 4638449 - 4639114 | 25236.0 |
| duf3408 domain-containing protein | DWY53_20510 | Not Available | Negative | 4639102 - 4639551 | 17099.4 |
| para family protein | DWY53_20515 | Not Available | Negative | 4639560 - 4640354 | 30188.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

