Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase | DWY53_20415 | Not Available | Negative | 4624002 - 4624204 | 7790.61 |
| duf3872 domain-containing protein | DWY53_20420 | Not Available | Negative | 4624201 - 4624659 | 17573.6 |
| conjugal transfer protein trao | DWY53_20425 | Not Available | Negative | 4624680 - 4625267 | 21710.0 |
| conjugative transposon protein tran | DWY53_20430 | Not Available | Negative | 4625264 - 4626178 | 34885.4 |
| conjugative transposon protein tram | DWY53_20435 | Not Available | Negative | 4626229 - 4627536 | 47924.3 |
| hypothetical protein | DWY53_20440 | Not Available | Negative | 4627487 - 4627789 | 11208.7 |
| conjugative transposon protein trak | DWY53_20445 | Not Available | Negative | 4627786 - 4628409 | 23932.5 |
| conjugative transposon protein traj | DWY53_20450 | Not Available | Negative | 4628532 - 4629545 | 37409.8 |
| duf4141 domain-containing protein | DWY53_20455 | Not Available | Negative | 4629548 - 4630177 | 23991.7 |
| duf3876 domain-containing protein | DWY53_20460 | Not Available | Negative | 4630174 - 4630542 | 13752.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

