Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | DWY53_20365 | Not Available | Negative | 4617288 - 4618472 | 43841.1 |
| d-alanyl-d-alanine dipeptidase | DWY53_20370 | Not Available | Negative | 4618476 - 4619141 | 25264.8 |
| transcriptional regulator | DWY53_20375 | Not Available | Negative | 4619165 - 4619512 | 13249.2 |
| thioredoxin | DWY53_20380 | Not Available | Negative | 4619550 - 4620029 | 17688.5 |
| hypothetical protein | DWY53_20385 | Not Available | Negative | 4620032 - 4620250 | 8004.92 |
| hypothetical protein | DWY53_20390 | Not Available | Negative | 4620455 - 4620703 | 9253.75 |
| hypothetical protein | DWY53_20395 | Not Available | Positive | 4620883 - 4621530 | 24488.9 |
| hypothetical protein | DWY53_20400 | Not Available | Positive | 4621543 - 4622040 | 18681.7 |
| glycosyl hydrolase family 88 | DWY53_20405 | Not Available | Negative | 4622097 - 4623395 | 49888.6 |
| hypothetical protein | DWY53_20410 | Not Available | Positive | 4623737 - 4623940 | 7696.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

