Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospho-sugar mutase | DWY53_01775 | Not Available | Positive | 463557 - 465302 | 64726.5 |
| eama family transporter | DWY53_01780 | Not Available | Positive | 465485 - 466405 | 34791.9 |
| aldose 1-epimerase family protein | DWY53_01785 | Not Available | Negative | 466454 - 467329 | 33918.6 |
| histidine kinase | DWY53_01790 | Not Available | Positive | 467496 - 469547 | 79985.5 |
| dna-binding response regulator | DWY53_01795 | Not Available | Positive | 469675 - 470439 | 29786.5 |
| wg repeat-containing protein | DWY53_01800 | Not Available | Positive | 470705 - 472399 | 63025.1 |
| hypothetical protein | DWY53_01805 | Not Available | Positive | 472422 - 472916 | 18040.2 |
| hypothetical protein | DWY53_01810 | Not Available | Positive | 473067 - 473552 | 18259.8 |
| hypothetical protein | DWY53_01815 | Not Available | Positive | 473565 - 474515 | 35079.1 |
| hypothetical protein | DWY53_01820 | Not Available | Positive | 474523 - 475458 | 34512.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

