Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_20265 | Not Available | Positive | 4592366 - 4592632 | 10676.0 |
| hypothetical protein | DWY53_20270 | Not Available | Positive | 4592750 - 4593463 | 27322.9 |
| hypothetical protein | DWY53_20275 | Not Available | Negative | 4593697 - 4594050 | 13467.2 |
| mobilization protein | DWY53_20280 | Not Available | Negative | 4594298 - 4595863 | 60559.0 |
| hypothetical protein | DWY53_20285 | Not Available | Negative | 4595982 - 4596368 | 14710.7 |
| hypothetical protein | DWY53_20290 | Not Available | Negative | 4596365 - 4596622 | 9307.2 |
| hypothetical protein | DWY53_20295 | Not Available | Positive | 4597244 - 4597456 | 8343.23 |
| transposase | DWY53_20300 | Not Available | Negative | 4597548 - 4599044 | 57890.7 |
| pyruvate, phosphate dikinase | DWY53_20305 | Not Available | Negative | 4599246 - 4601969 | 99937.6 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | DWY53_20310 | Not Available | Positive | 4602168 - 4603589 | 54000.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

