Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00730 family rossman fold protein | DWY53_20160 | Not Available | Positive | 4572419 - 4573006 | 21517.4 |
| duf4271 domain-containing protein | DWY53_20165 | Not Available | Positive | 4573003 - 4573815 | 31541.1 |
| uroporphyrinogen-iii synthase | DWY53_20170 | Not Available | Positive | 4573820 - 4574569 | 28619.6 |
| ribonuclease p protein component | DWY53_20175 | Not Available | Positive | 4574672 - 4575064 | 15158.8 |
| membrane protein insertion efficiency factor yidd | DWY53_20180 | Not Available | Positive | 4575061 - 4575282 | 8364.46 |
| hydrolase tatd | DWY53_20185 | Not Available | Positive | 4575297 - 4575926 | 24010.2 |
| tyrosine--trna ligase | DWY53_20190 | Not Available | Positive | 4576006 - 4577298 | 48043.5 |
| peptidase s41 | DWY53_20195 | Not Available | Negative | 4577423 - 4580677 | 121882.0 |
| Trna-gln | Not Available | Not Available | Positive | 4580813 - 4580883 | Not Available |
| flavin reductase family protein | DWY53_20205 | Not Available | Negative | 4581014 - 4581520 | 19394.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

