Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobyric acid synthase | DWY53_20110 | Not Available | Positive | 4560755 - 4562245 | 55380.6 |
| pyridoxal phosphate-dependent class ii aminotransferase | DWY53_20115 | Not Available | Positive | 4562238 - 4563248 | 38747.6 |
| cobalamin biosynthesis protein cobd | DWY53_20120 | Not Available | Positive | 4563230 - 4564162 | 34501.9 |
| Trna-gly | Not Available | Not Available | Positive | 4564198 - 4564273 | Not Available |
| hypothetical protein | DWY53_20130 | Not Available | Negative | 4564891 - 4566144 | 48858.8 |
| hypothetical protein | DWY53_20135 | Not Available | Negative | 4566272 - 4566496 | 8780.61 |
| acyltransferase | DWY53_20140 | Not Available | Negative | 4567317 - 4568459 | 43781.8 |
| metallophosphoesterase | DWY53_20145 | Not Available | Negative | 4568474 - 4569304 | 31429.9 |
| dha2 family efflux mfs transporter permease subunit | DWY53_20150 | Not Available | Negative | 4569358 - 4570734 | 49031.6 |
| methionine adenosyltransferase | DWY53_20155 | Not Available | Positive | 4571012 - 4572304 | 47598.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

