Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxylase subunit | DWY53_20060 | Not Available | Negative | 4546896 - 4547176 | 10611.9 |
| hypothetical protein | DWY53_20065 | Not Available | Negative | 4547142 - 4547393 | 9673.73 |
| anaerobic ribonucleoside-triphosphate reductase | DWY53_20070 | Not Available | Positive | 4548105 - 4550198 | 80525.2 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | DWY53_20075 | Not Available | Positive | 4550182 - 4550649 | 17754.3 |
| heme-binding protein | DWY53_20080 | Not Available | Negative | 4550699 - 4551895 | 45154.6 |
| tonb-dependent receptor | DWY53_20085 | Not Available | Negative | 4551929 - 4553989 | 78267.4 |
| tonb-dependent receptor | DWY53_20090 | Not Available | Negative | 4554361 - 4556538 | 81363.8 |
| putative transporter | DWY53_20095 | Not Available | Negative | 4556931 - 4558619 | 60780.7 |
| cobyrinate a,c-diamide synthase | DWY53_20100 | Not Available | Positive | 4558855 - 4560183 | 49093.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DWY53_20105 | Not Available | Positive | 4560180 - 4560755 | 22231.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

