Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyloxyacyl hydrolase | DWY53_19950 | Not Available | Positive | 4523584 - 4524894 | 49681.4 |
| hypothetical protein | DWY53_19960 | Not Available | Negative | 4525854 - 4526306 | 17226.2 |
| fimbrillin family protein | DWY53_19965 | Not Available | Positive | 4526365 - 4527760 | 50615.3 |
| fimbrillin family protein | DWY53_19970 | Not Available | Positive | 4527784 - 4528581 | 28071.6 |
| hypothetical protein | DWY53_19975 | Not Available | Positive | 4528762 - 4529247 | 18480.0 |
| conjugal transfer protein | DWY53_19980 | Not Available | Positive | 4529216 - 4531636 | 92695.5 |
| conjugal transfer protein trai | DWY53_19985 | Not Available | Positive | 4531659 - 4532180 | 19646.1 |
| hypothetical protein | DWY53_19990 | Not Available | Positive | 4532183 - 4532956 | 28722.6 |
| hypothetical protein | DWY53_19995 | Not Available | Positive | 4532962 - 4533585 | 24012.9 |
| conjugative transposon protein tram | DWY53_20000 | Not Available | Positive | 4533582 - 4534553 | 35430.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

