Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DWY53_01725 | Not Available | Positive | 452775 - 453671 | 34397.8 |
| putative sulfate exporter family transporter | DWY53_01730 | Not Available | Positive | 453760 - 454746 | 35134.1 |
| duf4010 domain-containing protein | DWY53_01735 | Not Available | Negative | 454839 - 456128 | 48232.9 |
| hypothetical protein | DWY53_01740 | Not Available | Negative | 456206 - 456688 | 17586.9 |
| ecf transporter s component | DWY53_01745 | Not Available | Positive | 456821 - 457330 | 18481.4 |
| twin-arginine translocase tata/tate family subunit | DWY53_01750 | Not Available | Positive | 457478 - 457681 | 7276.18 |
| twin-arginine translocase subunit tatc | DWY53_01755 | Not Available | Positive | 457688 - 458518 | 32372.7 |
| alanine dehydrogenase | DWY53_01760 | Not Available | Negative | 458605 - 459696 | 38984.7 |
| m23 family peptidase | DWY53_01765 | Not Available | Positive | 459890 - 461560 | 62671.9 |
| dipeptidase | DWY53_01770 | Not Available | Positive | 461603 - 463243 | 61146.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

