Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DWY53_19675 | Not Available | Positive | 4466499 - 4467035 | 21209.5 |
| hypothetical protein | DWY53_19680 | Not Available | Negative | 4466946 - 4467161 | 8398.44 |
| biopolymer transporter exbd | DWY53_19685 | Not Available | Negative | 4467217 - 4467681 | 17906.9 |
| biopolymer transporter exbd | DWY53_19690 | Not Available | Negative | 4467681 - 4468271 | 22472.8 |
| hypothetical protein | DWY53_19695 | Not Available | Negative | 4468315 - 4468776 | 16708.9 |
| mota/tolq/exbb proton channel family protein | DWY53_19700 | Not Available | Negative | 4468784 - 4469557 | 27566.2 |
| Trna-ser | Not Available | Not Available | Positive | 4469645 - 4469732 | Not Available |
| tatd family deoxyribonuclease | DWY53_19710 | Not Available | Negative | 4469900 - 4470673 | 29266.3 |
| polyprenyl synthetase family protein | DWY53_19715 | Not Available | Negative | 4470675 - 4471652 | 36793.8 |
| energy transducer tonb | DWY53_19720 | Not Available | Negative | 4471734 - 4472417 | 25649.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

