Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_19445 | Not Available | Negative | 4413164 - 4413889 | 26605.6 |
| susc/raga family tonb-linked outer membrane protein | DWY53_19455 | Not Available | Negative | 4415900 - 4419031 | 116281.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWY53_19465 | Not Available | Negative | 4419427 - 4420992 | 58966.7 |
| tonb-dependent receptor | DWY53_19470 | Not Available | Negative | 4421014 - 4424355 | 123127.0 |
| hypothetical protein | DWY53_19475 | Not Available | Positive | 4424336 - 4424566 | 9565.3 |
| creatininase family protein | DWY53_19480 | Not Available | Negative | 4425004 - 4425759 | 28518.2 |
| iron-containing alcohol dehydrogenase | DWY53_19485 | Not Available | Negative | 4425759 - 4426931 | 42892.9 |
| atp-binding protein | DWY53_19490 | Not Available | Positive | 4427155 - 4428426 | 49393.9 |
| hypothetical protein | DWY53_19505 | Not Available | Negative | 4430071 - 4433538 | 133347.0 |
| alpha-galactosidase | DWY53_19510 | Not Available | Positive | 4433790 - 4435946 | 82558.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

