Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-glucan family phosphorylase | DWY53_19285 | Not Available | Positive | 4381880 - 4384438 | 98136.5 |
| arginase family protein | DWY53_19290 | Not Available | Positive | 4384455 - 4385264 | 30783.7 |
| methylglyoxal synthase | DWY53_19295 | Not Available | Positive | 4385319 - 4385855 | 20470.6 |
| ppx/gppa family phosphatase | DWY53_19305 | Not Available | Negative | 4386323 - 4387231 | 33916.5 |
| polyphosphate kinase | DWY53_19310 | Not Available | Negative | 4387224 - 4387517 | 11117.0 |
| histidinol-phosphatase | DWY53_19315 | Not Available | Negative | 4387848 - 4388939 | 41790.9 |
| tonb-dependent receptor | DWY53_19320 | Not Available | Positive | 4389516 - 4392623 | 114493.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWY53_19325 | Not Available | Positive | 4392653 - 4393960 | 49282.1 |
| phosphodiester glycosidase family protein | DWY53_19330 | Not Available | Positive | 4394126 - 4395052 | 33916.9 |
| phosphodiester glycosidase family protein | DWY53_19335 | Not Available | Positive | 4395045 - 4395908 | 31291.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

