Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoacyl-trna hydrolase | DWY53_01675 | Not Available | Negative | 442843 - 443406 | 20618.0 |
| 50s ribosomal protein l25 | DWY53_01680 | Not Available | Negative | 443431 - 444027 | 21429.4 |
| duf3276 family protein | DWY53_01685 | Not Available | Negative | 444207 - 444590 | 14786.4 |
| transcription antitermination factor nusb | DWY53_01690 | Not Available | Positive | 444786 - 445712 | 36291.4 |
| preprotein translocase subunit yajc | DWY53_01695 | Not Available | Positive | 445769 - 446083 | 11609.3 |
| ybbr-like domain-containing protein | DWY53_01700 | Not Available | Positive | 446097 - 447110 | 39038.4 |
| dephospho-coa kinase | DWY53_01705 | Not Available | Positive | 447103 - 447699 | 22356.1 |
| hypothetical protein | DWY53_01710 | Not Available | Positive | 447766 - 448206 | 16021.2 |
| atp-dependent chaperone clpb | DWY53_01715 | Not Available | Negative | 449318 - 451906 | 97149.7 |
| hypothetical protein | DWY53_01720 | Not Available | Positive | 452181 - 452762 | 21484.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

