Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_19230 | Not Available | Positive | 4373389 - 4373574 | 7038.73 |
| hypothetical protein | DWY53_19235 | Not Available | Positive | 4373565 - 4373774 | 8005.49 |
| marc family protein | DWY53_19245 | Not Available | Positive | 4374413 - 4375138 | 27114.4 |
| ferritin | DWY53_19250 | Not Available | Positive | 4375189 - 4375671 | 18303.6 |
| class i fructose-bisphosphate aldolase | DWY53_19255 | Not Available | Positive | 4375700 - 4376749 | 38083.6 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | DWY53_19260 | Not Available | Positive | 4376763 - 4377512 | 28491.2 |
| hsp20/alpha crystallin family protein | DWY53_19265 | Not Available | Positive | 4377580 - 4378008 | 16368.5 |
| rna polymerase sigma factor | DWY53_19270 | Not Available | Positive | 4378055 - 4378549 | 19138.0 |
| 6-phosphofructokinase | DWY53_19275 | Not Available | Positive | 4378615 - 4379598 | 35605.6 |
| sodium:proton antiporter | DWY53_19280 | Not Available | Positive | 4379612 - 4381858 | 82334.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

