Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_19115 | Not Available | Negative | 4344660 - 4344935 | 10967.0 |
| duf3871 family protein | DWY53_19120 | Not Available | Negative | 4345025 - 4346044 | 38649.2 |
| winged helix-turn-helix transcriptional regulator | DWY53_19130 | Not Available | Negative | 4346529 - 4347170 | 24993.2 |
| hypothetical protein | DWY53_19135 | Not Available | Negative | 4347133 - 4347336 | 8101.99 |
| hypothetical protein | DWY53_19140 | Not Available | Negative | 4347671 - 4348177 | 20024.8 |
| hypothetical protein | DWY53_19145 | Not Available | Negative | 4348177 - 4348536 | 14036.7 |
| tonb-dependent receptor | DWY53_19160 | Not Available | Negative | 4350287 - 4353559 | 118866.0 |
| pectin esterase | DWY53_19165 | Not Available | Negative | 4353778 - 4354728 | 35858.5 |
| glycoside hydrolase family 88 protein | DWY53_19170 | Not Available | Negative | 4354743 - 4355972 | 47064.1 |
| pts sugar transporter subunit iic | DWY53_19175 | Not Available | Positive | 4356262 - 4357653 | 49974.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

