Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4876 domain-containing protein | DWY53_19010 | Not Available | Positive | 4329223 - 4330437 | 44704.4 |
| hypothetical protein | DWY53_19015 | Not Available | Positive | 4330452 - 4332026 | 58494.8 |
| hypothetical protein | DWY53_19020 | Not Available | Positive | 4332047 - 4332631 | 20936.8 |
| peptidase | DWY53_19025 | Not Available | Positive | 4332615 - 4333190 | 21616.7 |
| abc transporter atp-binding protein | DWY53_19030 | Not Available | Positive | 4333218 - 4334105 | 33883.1 |
| hypothetical protein | DWY53_19035 | Not Available | Positive | 4334129 - 4334800 | 25628.6 |
| duf4857 domain-containing protein | DWY53_19040 | Not Available | Positive | 4334833 - 4335861 | 39445.4 |
| hypothetical protein | DWY53_19050 | Not Available | Negative | 4336773 - 4337363 | 22584.1 |
| hypothetical protein | DWY53_19055 | Not Available | Negative | 4337621 - 4338127 | 19422.1 |
| hypothetical protein | DWY53_19060 | Not Available | Negative | 4338256 - 4338693 | 16836.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

