Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3836 domain-containing protein | DWY53_18790 | Not Available | Positive | 4270269 - 4270688 | 16015.9 |
| hypothetical protein | DWY53_18795 | Not Available | Positive | 4270688 - 4270987 | 11054.1 |
| cpbp family intramembrane metalloprotease | DWY53_18800 | Not Available | Positive | 4271160 - 4271990 | 30285.8 |
| duf2975 domain-containing protein | DWY53_18805 | Not Available | Positive | 4271999 - 4272646 | 23980.7 |
| duf2975 domain-containing protein | DWY53_18810 | Not Available | Positive | 4272663 - 4273310 | 24199.5 |
| hypothetical protein | DWY53_18815 | Not Available | Positive | 4273321 - 4273578 | 10168.7 |
| transcriptional regulator | DWY53_18820 | Not Available | Positive | 4273582 - 4273794 | 7789.65 |
| atp-dependent rna helicase | DWY53_18825 | Not Available | Positive | 4274056 - 4275930 | 70684.0 |
| hypothetical protein | DWY53_18835 | Not Available | Positive | 4278566 - 4279168 | 24072.5 |
| Trna-ser | Not Available | Not Available | Positive | 4279791 - 4279881 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

