Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobilization protein | DWY53_18735 | Not Available | Positive | 4258925 - 4260472 | 59221.6 |
| arac family transcriptional regulator | DWY53_18740 | Not Available | Negative | 4260510 - 4261346 | 32196.9 |
| qace family quaternary ammonium compound efflux smr transporter | DWY53_18745 | Not Available | Positive | 4261511 - 4261843 | 11558.9 |
| radical sam mobile pair protein b | DWY53_18750 | Not Available | Negative | 4262270 - 4263145 | 34042.1 |
| mbl fold metallo-hydrolase | DWY53_18755 | Not Available | Negative | 4263378 - 4264154 | 28968.2 |
| helix-turn-helix domain-containing protein | DWY53_18760 | Not Available | Positive | 4264284 - 4265183 | 35627.8 |
| Trna-met | Not Available | Not Available | Positive | 4265469 - 4265542 | Not Available |
| calcium-translocating p-type atpase, pmca-type | DWY53_18770 | Not Available | Positive | 4265698 - 4268328 | 97082.8 |
| had family phosphatase | DWY53_18775 | Not Available | Positive | 4268356 - 4268970 | 24088.8 |
| bifunctional riboflavin kinase/fad synthetase | DWY53_18780 | Not Available | Positive | 4268970 - 4269890 | 35285.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

