Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | DWY53_18685 | Not Available | Positive | 4245666 - 4248368 | 102567.0 |
| sam-dependent dna methyltransferase | DWY53_18690 | Not Available | Positive | 4248373 - 4249791 | 53051.5 |
| duf1016 domain-containing protein | DWY53_18695 | Not Available | Positive | 4249795 - 4250925 | 44049.9 |
| restriction endonuclease subunit s | DWY53_18700 | Not Available | Positive | 4250971 - 4251183 | 8093.82 |
| recombinase | DWY53_18705 | Not Available | Positive | 4251536 - 4253035 | 57380.1 |
| atp-binding protein | DWY53_18710 | Not Available | Positive | 4253212 - 4254504 | 48083.1 |
| hypothetical protein | DWY53_18715 | Not Available | Positive | 4254528 - 4255892 | 52157.8 |
| dna-binding protein | DWY53_18720 | Not Available | Positive | 4256034 - 4256339 | 11649.1 |
| helicase | DWY53_18725 | Not Available | Positive | 4256353 - 4257549 | 46797.0 |
| dna primase | DWY53_18730 | Not Available | Positive | 4257723 - 4258586 | 32599.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

