Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DWY53_18580 | Not Available | Positive | 4226033 - 4228210 | 81758.6 |
| arsenical-resistance protein | DWY53_18585 | Not Available | Negative | 4228459 - 4229505 | 38412.8 |
| arsenate reductase arsc | DWY53_18590 | Not Available | Negative | 4229518 - 4229946 | 15960.2 |
| arsenical pump-driving atpase | DWY53_18595 | Not Available | Negative | 4229951 - 4231663 | 62945.6 |
| arsenical resistance operon transcriptional repressor arsd | DWY53_18600 | Not Available | Negative | 4231692 - 4232018 | 12047.8 |
| sulfite exporter taue/safe family protein | DWY53_18605 | Not Available | Negative | 4232054 - 4232761 | 25781.8 |
| thioredoxin | DWY53_18610 | Not Available | Negative | 4232763 - 4233206 | 16803.2 |
| thioredoxin family protein | DWY53_18615 | Not Available | Negative | 4233217 - 4233450 | 8315.35 |
| arsr family transcriptional regulator | DWY53_18620 | Not Available | Negative | 4233528 - 4233854 | 12236.9 |
| hypothetical protein | DWY53_18625 | Not Available | Positive | 4234075 - 4234284 | 8234.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

