Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4625 domain-containing protein | DWY53_18470 | Not Available | Negative | 4192536 - 4193024 | 17879.0 |
| tonb-dependent receptor | DWY53_18475 | Not Available | Negative | 4193021 - 4195180 | 82018.8 |
| hypothetical protein | DWY53_18480 | Not Available | Negative | 4195229 - 4195591 | 13832.0 |
| inorganic phosphate transporter | DWY53_18485 | Not Available | Negative | 4195730 - 4196743 | 36114.1 |
| duf47 domain-containing protein | DWY53_18490 | Not Available | Negative | 4196760 - 4197407 | 25154.2 |
| deda family protein | DWY53_18495 | Not Available | Negative | 4197447 - 4198091 | 24501.6 |
| hypothetical protein | DWY53_18500 | Not Available | Negative | 4198224 - 4198649 | 15949.3 |
| lrp/asnc family transcriptional regulator | DWY53_18505 | Not Available | Positive | 4198829 - 4199299 | 17952.8 |
| magnesium and cobalt transport protein cora | DWY53_18510 | Not Available | Negative | 4199324 - 4200364 | 40193.7 |
| hypothetical protein | DWY53_18520 | Not Available | Negative | 4201314 - 4203710 | 90540.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

