Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_18420 | Not Available | Negative | 4182006 - 4182320 | 11189.4 |
| hypothetical protein | DWY53_18425 | Not Available | Negative | 4182314 - 4182517 | 7568.29 |
| hypothetical protein | DWY53_18430 | Not Available | Negative | 4182462 - 4182584 | 4346.13 |
| Trna-arg | Not Available | Not Available | Positive | 4182725 - 4182798 | Not Available |
| transporter | DWY53_18440 | Not Available | Negative | 4182868 - 4183584 | 26912.7 |
| dna-binding response regulator | DWY53_18445 | Not Available | Negative | 4183574 - 4184302 | 27616.5 |
| duf5113 domain-containing protein | DWY53_18450 | Not Available | Negative | 4184332 - 4188729 | 168977.0 |
| histone h1 | DWY53_18455 | Not Available | Negative | 4188878 - 4189051 | 6352.79 |
| l-lactate permease | DWY53_18460 | Not Available | Negative | 4189221 - 4190720 | 53058.6 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DWY53_18465 | Not Available | Negative | 4190982 - 4192268 | 46224.8 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

