Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur cluster repair di-iron protein | DWY53_18350 | Not Available | Positive | 4167895 - 4168626 | 27847.1 |
| glycoside hydrolase family 95 protein | DWY53_18355 | Not Available | Negative | 4168706 - 4171165 | 91860.4 |
| hypothetical protein | DWY53_18365 | Not Available | Positive | 4171727 - 4172185 | 17855.5 |
| j domain-containing protein | DWY53_18375 | Not Available | Positive | 4173498 - 4174469 | 35226.0 |
| hypothetical protein | DWY53_18380 | Not Available | Positive | 4174485 - 4174772 | 11267.4 |
| yihy/virulence factor brkb family protein | DWY53_18395 | Not Available | Positive | 4175445 - 4176773 | 50578.4 |
| riboflavin synthase | DWY53_18400 | Not Available | Negative | 4176906 - 4177508 | 22635.2 |
| xre family transcriptional regulator | DWY53_18405 | Not Available | Positive | 4177713 - 4178288 | 21391.5 |
| amp-binding protein | DWY53_18410 | Not Available | Positive | 4178295 - 4179947 | 62239.3 |
| transporter | DWY53_18415 | Not Available | Negative | 4180480 - 4181829 | 50768.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

