Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna degradosome polyphosphate kinase | DWY53_18300 | Not Available | Negative | 4155444 - 4157510 | 79761.8 |
| glycosyltransferase | DWY53_18305 | Not Available | Negative | 4157646 - 4158773 | 43509.6 |
| udp-2,3-diacylglucosamine diphosphatase | DWY53_18310 | Not Available | Negative | 4158770 - 4159573 | 31136.1 |
| hypothetical protein | DWY53_18315 | Not Available | Negative | 4159750 - 4160187 | 16855.3 |
| sensor histidine kinase | DWY53_18320 | Not Available | Negative | 4160291 - 4161577 | 49736.1 |
| dna-binding response regulator | DWY53_18325 | Not Available | Negative | 4161578 - 4162255 | 25927.3 |
| hypothetical protein | DWY53_18330 | Not Available | Negative | 4162476 - 4163213 | 27831.0 |
| arylsulfatase | DWY53_18335 | Not Available | Positive | 4163692 - 4165239 | 56931.5 |
| crp/fnr family transcriptional regulator | DWY53_18340 | Not Available | Negative | 4165520 - 4166110 | 22019.1 |
| hydroxylamine reductase | DWY53_18345 | Not Available | Positive | 4166225 - 4167883 | 61181.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

