Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DWY53_18180 | Not Available | Negative | 4132144 - 4132437 | 11277.9 |
| dna-binding protein | DWY53_18185 | Not Available | Positive | 4132688 - 4133080 | 14811.0 |
| dna-binding protein | DWY53_18190 | Not Available | Positive | 4133084 - 4133434 | 13869.8 |
| duf4099 domain-containing protein | DWY53_18195 | Not Available | Positive | 4133455 - 4135032 | 60034.1 |
| type ia dna topoisomerase | DWY53_18200 | Not Available | Positive | 4135092 - 4137182 | 77405.7 |
| duf1896 domain-containing protein | DWY53_18205 | Not Available | Positive | 4137346 - 4137798 | 17341.2 |
| hypothetical protein | DWY53_18215 | Not Available | Negative | 4141518 - 4141856 | 13226.1 |
| hypothetical protein | DWY53_18220 | Not Available | Negative | 4141866 - 4142072 | 7960.04 |
| is1595-like element isbbi1 family transposase | DWY53_18235 | Not Available | Positive | 4144069 - 4144905 | 32266.7 |
| atp synthase subunit gamma | DWY53_18245 | Not Available | Negative | 4145378 - 4146247 | 32458.6 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

