Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii pantothenate kinase | DWY53_01570 | Not Available | Negative | 415788 - 416612 | 29299.7 |
| 9-o-acetylesterase | DWY53_01575 | Not Available | Negative | 416690 - 418606 | 72630.5 |
| pap2 family protein | DWY53_01580 | Not Available | Negative | 418644 - 419261 | 23044.7 |
| response regulator | DWY53_01585 | Not Available | Negative | 419368 - 423357 | 152191.0 |
| hypothetical protein | DWY53_01590 | Not Available | Positive | 423654 - 424409 | 28172.2 |
| fluoride efflux transporter crcb | DWY53_01595 | Not Available | Negative | 424483 - 424848 | 13272.6 |
| helicase iv | DWY53_01600 | Not Available | Negative | 425101 - 427716 | 100936.0 |
| hypothetical protein | DWY53_01605 | Not Available | Negative | 427731 - 428390 | 26361.3 |
| hypothetical protein | DWY53_01610 | Not Available | Negative | 428416 - 428994 | 21212.9 |
| mobilization protein | DWY53_01615 | Not Available | Negative | 429311 - 430618 | 50698.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

