Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pcfj-like protein | DWY53_18080 | Not Available | Positive | 4113087 - 4114367 | 50421.7 |
| hypothetical protein | DWY53_18085 | Not Available | Negative | 4114861 - 4115115 | 10241.7 |
| single-stranded dna-binding protein | DWY53_18090 | Not Available | Positive | 4115465 - 4115866 | 15271.0 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase | DWY53_18095 | Not Available | Positive | 4117135 - 4118310 | 43918.3 |
| port family protein | DWY53_18100 | Not Available | Negative | 4118408 - 4119079 | 24189.6 |
| port family protein | DWY53_18105 | Not Available | Negative | 4119225 - 4119830 | 21310.4 |
| porin family protein | DWY53_18110 | Not Available | Negative | 4120034 - 4120555 | 19102.4 |
| hypothetical protein | DWY53_18115 | Not Available | Negative | 4120774 - 4120965 | 6973.57 |
| m23 family peptidase | DWY53_18120 | Not Available | Negative | 4120969 - 4121592 | 22827.6 |
| hypothetical protein | DWY53_18125 | Not Available | Negative | 4121602 - 4122261 | 24397.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

