Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_18025 | Not Available | Positive | 4102915 - 4103919 | 38985.6 |
| integrase | DWY53_18030 | Not Available | Positive | 4103906 - 4104928 | 39543.2 |
| atp-binding protein | DWY53_18040 | Not Available | Positive | 4105574 - 4108312 | 104797.0 |
| xre family transcriptional regulator | DWY53_18045 | Not Available | Negative | 4108391 - 4108696 | 11873.2 |
| molybdenum abc transporter atp-binding protein | DWY53_18050 | Not Available | Positive | 4109229 - 4109555 | 12819.5 |
| hypothetical protein | DWY53_18055 | Not Available | Positive | 4109568 - 4109804 | 8776.5 |
| tetr/acrr family transcriptional regulator | DWY53_18060 | Not Available | Positive | 4109910 - 4110533 | 24550.8 |
| hypothetical protein | DWY53_18065 | Not Available | Negative | 4110537 - 4111112 | 22634.2 |
| hypothetical protein | DWY53_18070 | Not Available | Positive | 4112490 - 4112669 | 6428.31 |
| pcfk-like protein | DWY53_18075 | Not Available | Positive | 4112672 - 4113085 | 15855.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

