Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| port family protein | DWY53_17755 | Not Available | Negative | 4060788 - 4061465 | 25348.9 |
| hypothetical protein | DWY53_17765 | Not Available | Positive | 4061950 - 4062138 | 7146.55 |
| Trna-asp | Not Available | Not Available | Positive | 4063082 - 4063158 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 4063186 - 4063262 | Not Available |
| formyltetrahydrofolate deformylase | DWY53_17785 | Not Available | Positive | 4063527 - 4064384 | 33273.6 |
| imidazole glycerol phosphate synthase subunit hish | DWY53_17790 | Not Available | Positive | 4064384 - 4064974 | 22270.8 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DWY53_17795 | Not Available | Positive | 4065016 - 4065735 | 26636.3 |
| imidazole glycerol phosphate synthase subunit hisf | DWY53_17800 | Not Available | Positive | 4065745 - 4066500 | 27219.5 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | DWY53_17805 | Not Available | Positive | 4066665 - 4067276 | 23137.6 |
| atp-binding cassette domain-containing protein | DWY53_17810 | Not Available | Positive | 4067281 - 4068036 | 28405.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

