Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialic acid o-acetyltransferase | DWY53_17705 | Not Available | Negative | 4048095 - 4048754 | 23931.9 |
| hypothetical protein | DWY53_17710 | Not Available | Negative | 4048751 - 4049704 | 37113.6 |
| atp-grasp domain-containing protein | DWY53_17715 | Not Available | Negative | 4049701 - 4050912 | 45235.6 |
| degt/dnrj/eryc1/strs family aminotransferase | DWY53_17720 | Not Available | Negative | 4050918 - 4052027 | 41690.2 |
| lipopolysaccharide biosynthesis protein | DWY53_17725 | Not Available | Negative | 4052051 - 4053487 | 53749.5 |
| hypothetical protein | DWY53_17730 | Not Available | Negative | 4053555 - 4054235 | 26435.0 |
| hypothetical protein | DWY53_17735 | Not Available | Negative | 4054251 - 4054532 | 10653.5 |
| atp-dependent helicase | DWY53_17740 | Not Available | Negative | 4054681 - 4057034 | 88623.7 |
| hypothetical protein | DWY53_17745 | Not Available | Positive | 4057263 - 4057691 | 16662.0 |
| beta-galactosidase | DWY53_17750 | Not Available | Negative | 4058451 - 4060490 | 78046.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

