Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_17655 | Not Available | Negative | 4038152 - 4038613 | 17760.6 |
| glycosyltransferase | DWY53_17660 | Not Available | Negative | 4039163 - 4039855 | 26630.0 |
| hypothetical protein | DWY53_17665 | Not Available | Negative | 4039855 - 4040445 | 22234.4 |
| polysaccharide pyruvyl transferase family protein | DWY53_17670 | Not Available | Negative | 4040486 - 4041568 | 42543.7 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | DWY53_17675 | Not Available | Negative | 4041581 - 4043299 | 64127.1 |
| sdr family oxidoreductase | DWY53_17680 | Not Available | Negative | 4043321 - 4044142 | 30475.8 |
| epsg family protein | DWY53_17685 | Not Available | Negative | 4044153 - 4045361 | 46943.2 |
| glycosyltransferase | DWY53_17690 | Not Available | Negative | 4045358 - 4046341 | 38109.2 |
| coa ester lyase | DWY53_17695 | Not Available | Negative | 4046722 - 4047624 | 33676.0 |
| maoc family dehydratase | DWY53_17700 | Not Available | Negative | 4047627 - 4048088 | 17375.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

