Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_01520 | Not Available | Positive | 397822 - 398547 | 25629.8 |
| p-ii family nitrogen regulator | DWY53_01525 | Not Available | Positive | 398665 - 399021 | 13455.3 |
| ammonium transporter | DWY53_01530 | Not Available | Positive | 399097 - 400455 | 47652.5 |
| glutamine synthetase type iii | DWY53_01535 | Not Available | Positive | 400513 - 402702 | 82007.6 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | DWY53_01540 | Not Available | Positive | 403016 - 404860 | 67627.3 |
| amidophosphoribosyltransferase | DWY53_01545 | Not Available | Positive | 405019 - 406902 | 71341.8 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) small subunit | DWY53_01550 | Not Available | Positive | 406928 - 408004 | 39969.4 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit | DWY53_01555 | Not Available | Positive | 408028 - 411252 | 119650.0 |
| response regulator | DWY53_01560 | Not Available | Positive | 411467 - 413812 | 89699.5 |
| dde transposase | DWY53_01565 | Not Available | Positive | 414182 - 415540 | 52916.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

