Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_17600 | Not Available | Negative | 4027452 - 4027814 | 14198.7 |
| hypothetical protein | DWY53_17605 | Not Available | Negative | 4027909 - 4028814 | 34570.9 |
| hypothetical protein | DWY53_17615 | Not Available | Negative | 4030784 - 4031125 | 13548.6 |
| hypothetical protein | DWY53_17620 | Not Available | Negative | 4031119 - 4031532 | 15456.7 |
| dtdp-glucose 4,6-dehydratase | DWY53_17625 | Not Available | Negative | 4031668 - 4032807 | 43781.6 |
| dtdp-4-dehydrorhamnose reductase | DWY53_17630 | Not Available | Negative | 4032827 - 4033741 | 33880.2 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DWY53_17635 | Not Available | Negative | 4033833 - 4034390 | 21203.2 |
| glucose-1-phosphate thymidylyltransferase | DWY53_17640 | Not Available | Negative | 4034478 - 4035386 | 33538.4 |
| glycosyltransferase family 1 protein | DWY53_17645 | Not Available | Negative | 4035412 - 4036545 | 44099.1 |
| hypothetical protein | DWY53_17650 | Not Available | Negative | 4036558 - 4038168 | 63005.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

