Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein zapa | DWY53_17540 | Not Available | Positive | 4012850 - 4013143 | 11772.0 |
| ribonuclease y | DWY53_17545 | Not Available | Positive | 4013244 - 4014779 | 57327.7 |
| patatin family protein | DWY53_17555 | Not Available | Negative | 4015911 - 4016765 | 32936.4 |
| peptidase m24 family protein | DWY53_17560 | Not Available | Positive | 4017095 - 4018486 | 51738.2 |
| aminopeptidase | DWY53_17565 | Not Available | Positive | 4018515 - 4019726 | 45970.4 |
| single-stranded-dna-specific exonuclease recj | DWY53_17570 | Not Available | Positive | 4019841 - 4021613 | 66543.5 |
| recq family atp-dependent dna helicase | DWY53_17575 | Not Available | Positive | 4021731 - 4023626 | 72922.9 |
| o-glcnacase | DWY53_17580 | Not Available | Positive | 4023673 - 4025886 | 84958.3 |
| tetratricopeptide repeat protein | DWY53_17585 | Not Available | Positive | 4025901 - 4026851 | 35751.7 |
| hypothetical protein | DWY53_17590 | Not Available | Positive | 4026838 - 4027028 | 7735.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

