Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | DWY53_17490 | Not Available | Negative | 4003280 - 4007239 | 149411.0 |
| atp-binding protein | DWY53_17495 | Not Available | Positive | 4007372 - 4008019 | 24812.1 |
| alanine:cation symporter family protein | DWY53_17500 | Not Available | Positive | 4008025 - 4009425 | 51044.3 |
| hypothetical protein | DWY53_17505 | Not Available | Positive | 4009559 - 4010185 | 24392.2 |
| uracil-dna glycosylase family protein | DWY53_17510 | Not Available | Positive | 4010200 - 4010793 | 23030.2 |
| Trna-trp | Not Available | Not Available | Positive | 4010861 - 4010936 | Not Available |
| radical sam protein | DWY53_17520 | Not Available | Negative | 4010993 - 4011538 | 20479.5 |
| 6-carboxytetrahydropterin synthase qued | DWY53_17525 | Not Available | Negative | 4011525 - 4011857 | 12835.3 |
| duf454 domain-containing protein | DWY53_17530 | Not Available | Positive | 4011992 - 4012354 | 14082.9 |
| hypothetical protein | DWY53_17535 | Not Available | Positive | 4012527 - 4012820 | 11779.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

