Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-dihydroxy-2-naphthoyl-coa synthase | DWY53_17285 | Not Available | Negative | 3947632 - 3948453 | 30339.4 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | DWY53_17290 | Not Available | Negative | 3948453 - 3950126 | 62975.0 |
| isochorismate synthase | DWY53_17295 | Not Available | Negative | 3950153 - 3951295 | 43212.4 |
| hotdog fold thioesterase | DWY53_17300 | Not Available | Negative | 3951292 - 3951699 | 14488.4 |
| mate family efflux transporter | DWY53_17305 | Not Available | Negative | 3951791 - 3953140 | 49603.2 |
| pyridine nucleotide-disulfide oxidoreductase | DWY53_17310 | Not Available | Positive | 3953377 - 3955878 | 90729.7 |
| marr family transcriptional regulator | DWY53_17315 | Not Available | Positive | 3955912 - 3956241 | 12226.9 |
| clc family h(+)/cl(-) exchange transporter | DWY53_17320 | Not Available | Positive | 3956274 - 3957872 | 59590.0 |
| diacylglucosamine hydrolase | DWY53_17325 | Not Available | Positive | 3957882 - 3958472 | 22791.2 |
| arac family transcriptional regulator | DWY53_17330 | Not Available | Positive | 3958469 - 3960286 | 70691.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

