Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4248 domain-containing protein | DWY53_17235 | Not Available | Negative | 3937872 - 3938096 | 8370.25 |
| duf3987 domain-containing protein | DWY53_17240 | Not Available | Negative | 3938114 - 3940057 | 71616.3 |
| virulence protein e | DWY53_17245 | Not Available | Negative | 3940061 - 3940630 | 21603.9 |
| hypothetical protein | DWY53_17250 | Not Available | Positive | 3940816 - 3941283 | 16988.2 |
| dead/deah box helicase | DWY53_17255 | Not Available | Positive | 3941339 - 3943618 | 86454.2 |
| duf4250 domain-containing protein | DWY53_17260 | Not Available | Positive | 3943733 - 3943909 | 6921.42 |
| arac family transcriptional regulator | DWY53_17265 | Not Available | Negative | 3943972 - 3944856 | 34283.2 |
| o-succinylbenzoic acid--coa ligase | DWY53_17270 | Not Available | Negative | 3945112 - 3946197 | 40588.3 |
| o-succinylbenzoate synthase | DWY53_17275 | Not Available | Negative | 3946194 - 3947249 | 39820.0 |
| mmcq/yjbr family dna-binding protein | DWY53_17280 | Not Available | Negative | 3947228 - 3947611 | 14976.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

