Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobilization protein | DWY53_17185 | Not Available | Positive | 3928088 - 3929485 | 53840.6 |
| hypothetical protein | DWY53_17190 | Not Available | Positive | 3929620 - 3930450 | 31371.9 |
| integration host factor subunit beta | DWY53_17195 | Not Available | Positive | 3930507 - 3930794 | 10544.8 |
| hypothetical protein | DWY53_17200 | Not Available | Positive | 3930922 - 3931206 | 10922.3 |
| peptidase s24 | DWY53_17205 | Not Available | Positive | 3931203 - 3931652 | 16828.9 |
| y-family dna polymerase | DWY53_17210 | Not Available | Positive | 3931649 - 3932920 | 47673.5 |
| hypothetical protein | DWY53_17215 | Not Available | Positive | 3933111 - 3933803 | 26000.7 |
| hypothetical protein | DWY53_17220 | Not Available | Negative | 3934936 - 3935805 | 35181.2 |
| n-acetylmuramoyl-l-alanine amidase | DWY53_17225 | Not Available | Negative | 3936221 - 3936739 | 19703.7 |
| dna-binding protein | DWY53_17230 | Not Available | Negative | 3937050 - 3937589 | 19142.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

