Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_17135 | Not Available | Negative | 3921404 - 3921745 | 12410.5 |
| hypothetical protein | DWY53_17140 | Not Available | Negative | 3921765 - 3922130 | 14222.1 |
| hypothetical protein | DWY53_17145 | Not Available | Negative | 3922127 - 3922342 | 7770.04 |
| hypothetical protein | DWY53_17150 | Not Available | Negative | 3922348 - 3922935 | 22386.1 |
| crp/fnr family transcriptional regulator | DWY53_17155 | Not Available | Negative | 3923228 - 3923833 | 24254.6 |
| hypothetical protein | DWY53_17160 | Not Available | Negative | 3924059 - 3925201 | 44856.0 |
| hypothetical protein | DWY53_17165 | Not Available | Negative | 3925451 - 3925681 | 8812.56 |
| duf3408 domain-containing protein | DWY53_17170 | Not Available | Negative | 3926098 - 3926556 | 17501.0 |
| para family protein | DWY53_17175 | Not Available | Negative | 3926558 - 3927250 | 26160.2 |
| plasmid mobilization relaxosome protein mobc | DWY53_17180 | Not Available | Positive | 3927694 - 3928086 | 15261.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

