Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 385811 - 385886 | Not Available |
| carboxypeptidase regulatory-like domain-containing protein | DWY53_01475 | Not Available | Negative | 385911 - 386735 | 31812.3 |
| hypothetical protein | DWY53_01480 | Not Available | Negative | 386809 - 387027 | 8828.55 |
| hypothetical protein | DWY53_01485 | Not Available | Negative | 386985 - 387266 | 11031.4 |
| hypothetical protein | DWY53_01490 | Not Available | Negative | 387202 - 387435 | 8584.44 |
| asparagine synthase b | DWY53_01495 | Not Available | Negative | 387514 - 389184 | 62823.6 |
| glutamate synthase subunit beta | DWY53_01500 | Not Available | Negative | 389201 - 390541 | 48774.7 |
| glutamate synthase large subunit | DWY53_01505 | Not Available | Negative | 390582 - 395060 | 164845.0 |
| diaminopimelate epimerase | DWY53_01510 | Not Available | Positive | 395585 - 396427 | 30283.6 |
| ll-diaminopimelate aminotransferase | DWY53_01515 | Not Available | Positive | 396474 - 397703 | 45919.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

