Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3945 domain-containing protein | DWY53_17085 | Not Available | Negative | 3911942 - 3913408 | 55595.2 |
| duf4138 domain-containing protein | DWY53_17090 | Not Available | Negative | 3913410 - 3914504 | 42310.3 |
| hypothetical protein | DWY53_17095 | Not Available | Negative | 3914510 - 3914689 | 6940.87 |
| conjugative transposon protein tram | DWY53_17100 | Not Available | Negative | 3914686 - 3915963 | 48668.4 |
| hypothetical protein | DWY53_17105 | Not Available | Negative | 3915953 - 3916615 | 25138.9 |
| hypothetical protein | DWY53_17110 | Not Available | Negative | 3916621 - 3917670 | 37544.1 |
| hypothetical protein | DWY53_17115 | Not Available | Negative | 3917675 - 3918271 | 22919.6 |
| hypothetical protein | DWY53_17120 | Not Available | Negative | 3918276 - 3918491 | 7682.51 |
| trag family conjugative transposon atpase | DWY53_17125 | Not Available | Negative | 3918484 - 3921090 | 99866.9 |
| hypothetical protein | DWY53_17130 | Not Available | Negative | 3921098 - 3921400 | 11262.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

