Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_16920 | Not Available | Positive | 3879663 - 3880226 | 21611.7 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DWY53_16925 | Not Available | Positive | 3880278 - 3881180 | 35088.3 |
| alpha-l-fucosidase | DWY53_16930 | Not Available | Positive | 3881189 - 3883228 | 76756.4 |
| hypothetical protein | DWY53_16935 | Not Available | Negative | 3883406 - 3884179 | 29786.4 |
| tlpa family protein disulfide reductase | DWY53_16940 | Not Available | Negative | 3884301 - 3886409 | 80293.8 |
| thiol:disulfide interchange protein | DWY53_16945 | Not Available | Negative | 3886432 - 3887622 | 44913.9 |
| hypothetical protein | DWY53_16950 | Not Available | Negative | 3887653 - 3888996 | 51729.6 |
| m56 family peptidase | DWY53_16955 | Not Available | Negative | 3889007 - 3890893 | 70580.9 |
| blai/meci/copy family transcriptional regulator | DWY53_16960 | Not Available | Negative | 3890927 - 3891289 | 14012.8 |
| hypothetical protein | DWY53_16970 | Not Available | Positive | 3892117 - 3892389 | 9527.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

