Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel family protein | DWY53_16860 | Not Available | Positive | 3867244 - 3868437 | 45221.0 |
| hypothetical protein | DWY53_16875 | Not Available | Negative | 3869718 - 3870311 | 22584.9 |
| phosphoribosylformylglycinamidine cyclo-ligase | DWY53_16880 | Not Available | Positive | 3871546 - 3872715 | 42663.2 |
| hypothetical protein | DWY53_16885 | Not Available | Positive | 3872696 - 3872974 | 10689.0 |
| peptide chain release factor 1 | DWY53_16890 | Not Available | Positive | 3872958 - 3874073 | 42032.6 |
| orotidine 5'-phosphate decarboxylase | DWY53_16895 | Not Available | Positive | 3874110 - 3874928 | 30601.6 |
| hd domain-containing protein | DWY53_16900 | Not Available | Positive | 3875017 - 3876252 | 47212.3 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DWY53_16905 | Not Available | Positive | 3876385 - 3877425 | 36895.4 |
| bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydratase | DWY53_16910 | Not Available | Positive | 3877431 - 3878816 | 51127.1 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DWY53_16915 | Not Available | Positive | 3878833 - 3879600 | 27740.6 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

