Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein subunit alpha/fixb family protein | DWY53_16810 | Not Available | Negative | 3855515 - 3856534 | 36698.3 |
| electron transfer flavoprotein beta subunit/fixa family protein | DWY53_16815 | Not Available | Negative | 3856540 - 3857433 | 31873.2 |
| hypothetical protein | DWY53_16820 | Not Available | Positive | 3857800 - 3858060 | 9561.44 |
| hypothetical protein | DWY53_16825 | Not Available | Positive | 3858139 - 3859203 | 40208.2 |
| hypothetical protein | DWY53_16830 | Not Available | Positive | 3859200 - 3859778 | 22821.9 |
| signal peptidase i | DWY53_16835 | Not Available | Positive | 3859775 - 3860596 | 32028.7 |
| hypothetical protein | DWY53_16840 | Not Available | Positive | 3860750 - 3861292 | 19666.0 |
| tolc family protein | DWY53_16845 | Not Available | Positive | 3861424 - 3862821 | 51961.1 |
| efflux rnd transporter periplasmic adaptor subunit | DWY53_16850 | Not Available | Positive | 3862876 - 3864006 | 41358.6 |
| multidrug efflux rnd transporter permease subunit | DWY53_16855 | Not Available | Positive | 3864011 - 3867127 | 112560.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

