Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | DWY53_16700 | Not Available | Negative | 3836057 - 3837472 | 53421.8 |
| general stress protein | DWY53_16715 | Not Available | Positive | 3838712 - 3839392 | 26137.8 |
| duf3795 domain-containing protein | DWY53_16720 | Not Available | Positive | 3839398 - 3839742 | 13208.1 |
| glutamine amidotransferase | DWY53_16725 | Not Available | Positive | 3839745 - 3840362 | 22787.4 |
| hypothetical protein | DWY53_16730 | Not Available | Positive | 3840465 - 3840671 | 7690.22 |
| nudix domain-containing protein | DWY53_16735 | Not Available | Negative | 3841399 - 3841899 | 19013.3 |
| histidine ammonia-lyase | DWY53_16740 | Not Available | Negative | 3842018 - 3843514 | 55180.9 |
| methenyltetrahydrofolate cyclohydrolase | DWY53_16745 | Not Available | Negative | 3843549 - 3844172 | 22967.8 |
| imidazolonepropionase | DWY53_16750 | Not Available | Negative | 3844193 - 3845437 | 44889.3 |
| gxxexxy protein | DWY53_16755 | Not Available | Negative | 3845484 - 3845870 | 15150.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

